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Instrumentation

Please click on the instrument name for more information about its current configuration.  You can schedule time on any instrument you have been trained to use via iLab.  To schedule a sort on any of the sorters listed below, please use iLab as well, understanding that your proposed sort time is not valid until it has been approved by UFC staff, usually within one business day. (Sorts not yet approved appear in orange; approved sorts appear in purple.) Please refer to Core policies on Scheduling and Cancelation

When planning new experiments, we recommend using the panel builder app at FluoroFinder (free registration for Pitt users).

If you experience any issues with a machine after hours or on a weekend, please use the Problem Log to report it, and we will resolve the issue as soon as we can.

Instrument Name   Type Location Name in FluoroFinder
Aria Assembly Hood (was Aria 10 Hood) Traditional Flow Sorter Ford - G536 Aria Assembly G536
Attune Traditional Flow Analyzer Ford - G530 Attune NxT Assembly G530
Aurora Blue Spectral Flow Analyzer Ford - G530 Aurora Blue Assembly G530
Aurora Pink Spectral Flow Analyzer Ford - G530 (same config as Aurora Blue)
Fortessa Assembly (was Fortessa 15) Traditional Flow Analyzer Ford - G530 Fortessa Assembly G530
ImageStream Imaging Flow Analyzer Ford - G536 ImageStream Mark II Assembly G536
LSR Assembly (was LSR 10) Traditional Flow Analzer Ford - G530 LSR II Assembly G530
ZellScanner Chip Cytometer Ford - G536 N/A
Aria-Assembly 5 Laser (replaced Aria 3 laser) Traditional Flow Sorter BST - E1514 Aria 5 Laser | Assembly G536
Aria-15 Hood 5 Laser (was Aria 15 Hood) Traditional Flow Sorter BST - E1514 Aria 5 Laser BST E1514
Aurora Black Spectral Flow Analyzer BST - E1514 Aurora Black BST E1514
Aurora Yellow Spectral Flow Analyzer BST - E1514 Aurora Yellow BST E1514
Fortessa 7S (Hood) Traditional Flow Analyzer BST - S756 Fortessa BST S756
Fortessa 12 Traditional Flow Analyzer BST - E1211 Fortessa BST E1211
LSR 15 Traditional Flow Analyzer BST - E1514 LSR II BST E1514
Aurora CS Spectral Flow Sorter BST - E1514 Aurora CS BST E1514
AURORA

The Auroras are equipped with 5 lasers - 488 (blue), 640 (red), 405 (violet), 561 (yellow-green) 355 (UV).

64 Fluorescence channels:  355nm = 16 channels; 405nm = 16 channels; 488nm = 14 channels;  640nm = 8 channels; 561nm = 10 channels.  Efficient spectrum capture for dyes emitting in the 360nm-900nm range.  No filter changes required for any fluorochromes.

Aurora Black has a plate loader for 96 well plates.

Aurora Pink and Aurora Yellow have a plate loader for 96 well plates and a 40 tube holder.

Aurora CS

Aurora CS (Cell Sorter)

The Aurora CS is equipped with 5 lasers - 488 (blue), 640 (red), 405 (violet), 561 (yellow-green) 355 (UV).

64 Fluorescence channels:  355nm = 16 channels; 405nm = 16 channels; 488nm = 14 channels;  640nm = 8 channels; 561nm = 10 channels.  Efficient spectrum capture for dyes emitting in the 360nm-900nm range.  No filter changes required for any fluorochromes.

6 way sorts into 1.5 ml Eppendorf tubes.  4 way sorts into 5ml FACS tubes.  2 way sorts into 15ml Falcon tubes.  Single Cell sorting into 96 well plates (no other plate sizes at this time)

IMAGESTREAM

Lasers:  488nm 200mW - 561nm 200mW - 375nm 70mW - 405nm 175mW - 642nm 150mW - 785nm Dark Field Laser

MultiMag 60X,40X,20X

Extended Depth of Field (EDF) 

Auto-Sampler (96 well plates)

12 Imaging Channels

Review Configuration

Detector name Band (nm) Fluorochromes
Channel 1 435-480 475/45 DAPI, BV421, PacBlue
Channel 2 480-560 428/65 BV510, PacOrange -- FITC, GFP
Channel 3 569-595 528/65 QD565 -- Cy3, DSRed -- PE
Channel 4 595-642 610/30 QD625 -- PE-TXRed, RFP -- mCherry
Channel 5 642-745 702/85 QD705, BV711 -- PerCP -- PeCy5, DRAQ5
Channel 6 745-780 762/35 QD800,BV786 -- PeCy7 --Pe-AF750
Channel 7 435-505 457/45 DAPI, BV 421
Channel 8 505-570 537/65 BV510, QD525
Channel 9 570-595 582/25 QD565,QD585 -- Bright Field
Channel10 595-642 610/30 QD625,BV605
Channel 11 642-745 702/85 QD705,BV711 -- APC, AF700
Channel 12 745-780 762/35 BV786 -- APC-Cy7 -- AF750
ARIA Assembly 5 LASER

The Aria is equipped with 5 lasers 488 (blue), 640 (red), 405 (violet), 552 (light green) and 355 (UV) for a total of 16 fluorescent parameters running on Diva 9/Windows 10.

Detector name LP Mirror BP Filter Fluorochromes
355 Laser A 690 740/35,  BUV737
355 Laser B --- 379/28 BUV395
405 Laser A 750 780/60 BV786
405 Laser B 690 710/50 BV711
405 Laser C 630 660/20 BV650, QD655
405 Laser D 505 525/50 AmCyan, VioGreen, PacGreen, BV510
405 Laser E --- 450/50 PacBlue, V450, BV421, VioBlue, eBFP
488 Laser A 685 710/50 PerCP-Cy5.5
488 Laser B 505 530/30 FITC, GFP, AF488
552 Laser A 750 780/60 PE-Cy7
552 Laser B 685 710/50 PE-Cy5.5
552 Laser C 600 610/20 PE, TdTomato
552 Laser D --- 575/26 PE-TxRed, mCherry, 7AAD
635 Laser A 750 780/60 APC-Cy7, APC-Fire750
635 Laser B 690 730/45 AF700
635 Laser C --- 670/30 APC, AF647, Cy5
FORTESSA ASSEMBLY (was Fortessa 15)

The FORTESSA is equipped with 5 lasers 488 (blue), 640 (red), 405 (violet), 532 (Green), 355 (UV) for a total of 16 fluorescent parameters, running on Diva 8/Windows 7. Lasers: 405 100mW Trigon, 488 50mW Octagon, 532 150mW Octagon, 640 100mW Trigon, 355 20mW Trigon.

Detector name LP Mirror BP Filter Fluorochromes
532 Laser A 750 780/60 PE-CY7
532 Laser B 670 695/40 PE-CY5.5
532 Laser C 635 670/30 PE-Cy5
532 Laser D 600 610/20 PE-TxRED,ECD
532 Laser E --- 575/26 PE
640 Laser A 785 780/60 APC-Cy7
640 Laser B 735 720/20 Alexa 700
640 Laser C --- 660/20 APC
405 Laser A 595 610/20 BV605
405 Laser B 505 525/50 V500
405 Laser C --- 450/50 Pacific Blue
488 Laser A 685 710/50 PerCP Cy5.5
488 Laser B 655 670/30 PerCP
488 Laser C 505 530/30 (515/20) FITC (GFP)
488 Laser D --- 488/10 SSC
355 Laser A 690 740/35 BUV 737
  505 530/30 Hoechst
355 Laser B --- 379/28 BUV 395
    450/50 DAPI, Alexa 350
LSR ASSEMBLY (was LSR 10)

The LSR II is equipped with 5 lasers running  on Diva 8/Windows 7. Lasers: 355 20mW Trigon (UV), 405 50mW Trigon (violet), 488 20mW Trigon (blue), 532 150mW Octagon (green), 640 100mW Trigon (red).  15 parameters. 

Detector name LP Mirror BP Filter Fluorochromes
488 Laser A 635 695/40 PerCP/PerCP-Cy5.5
488 Laser B 505 525/50 FITC, GFP
488 Laser C --- 488/10 SSC
532 Laser A 705 780/60 PE-Cy7
532 Laser B 685 710/50 PE-C5.5
532 Laser C 635 670/30 PE-Cy5
532 Laser D 595 610/20 PETxRED/PI
532 Laser E --- 575/20 PE
640 Laser A 755 780/60 APC-Cy7
640 Laser B 700 720/20 Alexa 700
640 Laser C --- 660/20 APC
405 Laser A 595 610/20 BV605
405 Laser B 505 525/50 V500, BV510, Alexa 430
405 Laser C --- 450/50 Pacific Blue, Alexa 405, BV421,V450
355 Laser A 690 740/35 BUV 737
  505 530/30 Indo 1
    670LP Red Side pop.
355 Laser B --- 379/28 BUV 395
    405/20 Indo-1 High
    450/50 DAPI, Alexa 350, Indo Violet
LSR-15

The LSR II is equipped with 5 lasers running on Diva 8/Windows 7.   Lasers:  355 60mW Trigon (UV), 405 50mW Trigon (violet), 488 20mW Trigon (blue), 532 150mW Octagon (green), 633 40mW Trigon (red). 15 Parameters.

Detector name LP Mirror BP Filter Fluorochromes
488 Laser A 635 695/40 PerCP/PerCP-Cy5.5
488 Laser B 505 515/20 FITC/GFP
488 Laser C --- 488/10 SSC
532 Laser A 755 780/60 PE-Cy7
532 Laser B 685 710/50 PE-Cy5.5
532 Laser C 635 670/30 PE-Cy5
532 Laser D 595 610/20 PETxRED/PI
532 Laser E --- 575/20 PE
640 Laser A 755 780/60 APC-Cy7, APC-H7
640 Laser B 700  720/20 Alexa 700
640 Laser C --- 660/20 APC
405 Laser A 595 610/20 BV605
405 Laser B 505 525/50 V500, BV510
405 Laser C --- 450/50 Pacific Blue, BV421,V450
355 Laser A 690 740/35 BUV 737
  505 530/30 Indo-1, Hoechst
355 Laser B --- 379/28 BUV 395
    405/20 Indo-1 High
    450/50 DAPI, Indo-1 low
FORTESSA-7S 

The FORTESSA is equipped with 4 lasers 488 (blue), 640 (red), 405 (violet), 561 (Green),  for a total of 13 fluorescent parameters, running on Diva 8/Windows 7. Lasers: 405 100mW Trigon, 488 20mW Trigon, 561 100mW Octagon, 640 40mW Trigon. 

Detector Name LP Mirror BP Filter Fluorochromes
561 Laser A 750 780/60 PE-CY7
561 Laser B 670 695/40 PE-CY5.5
561 Laser C 635 670/30 PE-Cy5
561 Laser D 600 610/20 PE-TxRED,ECD
561 Laser E --- 582/15 PE
640 Laser A 750 780/60 APC-Cy7
640 Laser B 685 720/20 Alexa 700
640 Laser C --- 670/30 APC
405 Laser A 600 610/20 BV605
405 Laser B 505 525/50 V500
405 Laser C --- 450/50 Pacific Blue
488 Laser A 685 710/50 PerCP Cy5.5
       
488 Laser B 505 530/30 (515/20) FITC (GFP)
488 Laser C --- 488/10 SSC
ARIA-15 HOOD 5 LASER (was Aria 15 Hood)

The Aria is equipped with 5 lasers running Diva 8 on Windows 7.  Lasers: 355 20mW Trigon, 405 50mW Trigon, 488 100mW Trigon, 532 150mW Octagon, 635 30mW Trigon. 15 Paramaters. 

Detector name LP Mirror BP Filter Fluorochromes
488 Laser A 685 695/40 PerCP/PerCP-Cy5.5
488 Laser B 505 520/15 FITC, GFP
488 Laser C --- 488/10 SSC
532 Laser A 740 780/40 PE-Cy7
532 Laser B 690 710/50 PE-C5.5
532 Laser C 640 660/40 PE-Cy5
532 Laser D 600 610/20 PETxRED/PI
532 Laser E --- 575/26 PE
640 Laser A 735 780/60 APC-Cy7
640 Laser B 710 730/45 Alexa 700
640 Laser C --- 660/20 APC
405 Laser A 600 605/40 BV 610
405 Laser B 505 525/50 V500, BV510, Alexa 430
405 Laser C --- 450/50 Pacific Blue, Alexa 405, BV421,V450
355 Laser A 505 530/30 Indo Blue
  690 740/35 BUV
    670LP Red Side pop.
355 Laser B --- 379/28 BUV 395
    405/20 Indo-1 High
    450/40 DAPI, Alexa 350, Indo Violet
Fortessa-12 

The VMI Fortessa is equipped with 4 lasers running Diva 8/Windows 7.  Lasers: 355 20mW Trigon (UV), 405 100mW Octagon (violet), 488 100mW Octagon (blue),  640 100mW Trigon (red). 15 Parameters.  

Detector name LP Mirror BP Filter Fluorochromes
488 Laser A 750 780/60 PE-Cy7
488 Laser B 685 710/50 PerCP-Cy5.5
488 Laser C 600 610/20 PE-TxRED
488 Laser D 550 575/25 PE
488 Laser E 505 530/30 FITC
488 Laser F --- 488/10 SSC
       
640 Laser A 750 780/60 APC-Cy7
640 Laser B 690 730/45 Alexa 700
640 Laser C --- 670/30 APC
405 Laser A 630 660/20 Qdot655
405 Laser B 595 605/40

Qdot605

405 Laser C 505 525/50

AmCyan

405 Laser D --- 450/50 Pacific Blue
    670LP Red Side pop.
355 Laser A 690 740/37

BUV737

355 Laser B   379/28 BUV395
    450/50 DAPI
ARIA ASSEMBLY HOOD (was Aria 10 Hood)

The Rheum Aria is equipped with 5 lasers running Diva 8/Windows 7. Lasers:  355 60mW Trigon (UV), 405 100mW Trigon (Violet), 488 100mW Trigon (Blue), 532 100mW Octagon (Green), 640 100mW Trigon (Red).  15 Paramaters. 

Detector name LP Mirror BP Filter Fluorochromes
532 Laser A 750 780/60 PE-Cy7
532 Laser B 690 710/50 Pe-Cy5.5
532 Laser C 595 670/40 Pe-Cy5
532 Laser D 550 610/20 PE-TxRED
532 Laser E 505 575/25 PE
488 Laser C 690 695/40 PerCP Cy5.5
488 Laser B 505 515/20 FITC
488 Laser A 488   SSC
640 Laser A 750 780/60 APC-Cy7
640 Laser B 690 730/45 Alexa 700
640 Laser C --- 670/30 APC
405 Laser A 570 585/42 BV605
405 Laser B 505 525/50

V500,BV510

405 Laser C --- 450/50

PacBlue, V450,BV421

355 Laser A 690 740/35 BUV737
355 Laser B   379/28 BUV393
ATTUNE

The Attune NxT is equipped with 4 lasers 488 (blue), 640 (red), 405 (violet), 561 (Green),  for a total of 14 fluorescent parameters, running Windows 7. Lasers: 405 100mW Trigon, 488 100mW Trigon, 561 140mW Octagon, 640 140mW Trigon.

Detector Name Attune Detector Name LP Mirror BP Filter Fluorochromes
532 Laser A GL4 740 780/60 PE-CY7
532 Laser B GL3 650 695/40 PE-CY5.5
532 Laser C GL2 600 620/15 PE-TxRED, ECD
532 Laser D GL1 550 575/36 PE
640 Laser A RL3 740 780/60 APC-Cy7
640 Laser B RL2 690 720/30 Alexa 700
640 Laser C RL1 654 670/14 APC
405 Laser A VL4 650 710/50 BV711
405 Laser B VL3 555 603/48 BV605
405 Laser C VL2 495 512/25 BV510
405 Laser D VL1 417 440/50 BV421
488 Laser A BL3 650 695/40 PerCP, PerCP-Cy5.5
488 Laser B BL2 555 590/40 PE
488 Laser C BL1 503 525/50 FITC
Canopy's ZellScanner One

Canopy's ZellScanner One is a fully intergrated automated imaging system that enables quantitaitve measure of high-plex protein biomarker assays across a range of sample types.  Termed "Chip Cytometry", single cell and whole tissue samples can be loaded onto a chip - the latter via section-on-coverslip attachment.  The enlosed chamber acts as a biorepository, providing antibody staining and washing via stain/wash/photobleach cycles, and then stored with tissue preservation for up to two years.  This non-destructive analysis allows for multiple interrogations of the same sample.

Filter Sets
ZellScanner Filter Set Name "Casual" Name Excititation Emission
FS395  BUV395 BP 365/2 nm BP 392/23 nm
FS421 DAPI/BV421 BP 390/40 BP 460/50
FS488 FITC/GFP BP 470/40 BP 525/50
FS560 PE BP 545/25 BP 605/70
FSPerCP PerCPCy5.5 BP 435/40 BP 710/75
ALL (Bleach)   LP 364